BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB017F04LP1|AL427185
(874 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1284 1015 0.0
>3x_Contig1284
Length = 6170
Score = 1015 bits (510), Expect = 0.0
Identities = 514/516 (99%)
Strand = Plus / Minus
Query: 1 ctkcacaatttcaagatagaagagctaaatattcccttgatgagagcacatctgggagtt 60
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 533 ctgcacaatttcaagatagaagagctaaatattcccttgatgagagcacatctgggagtt 474
Query: 61 ctactggctgccatgctattgggtggaatgcaattgaatatcattatgctcgaacctgtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 ctactggctgccatgctattgggtggaatgcaattgaatatcattatgctcgaacctgtt 414
Query: 121 ccgaaacaaaacgtcactgatgtwgaaaaagaggcacctactacctacgctaaaggagat 180
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 413 ccgaaacaaaacgtcactgatgtcgaaaaagaggcacctactacctacgctaaaggagat 354
Query: 181 atcaaagtgtgcaatcaaaccagagagagattcgtttccttaaaggcaagtgcacagacg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 atcaaagtgtgcaatcaaaccagagagagattcgtttccttaaaggcaagtgcacagacg 294
Query: 241 ctgacacctgagcttgaaatcgctatcgaaaaaaactggatgaatgaatacccaactaat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 ctgacacctgagcttgaaatcgctatcgaaaaaaactggatgaatgaatacccaactaat 234
Query: 301 tattccggttctgatgctacatcaacaccttctgtcatcaaacataagctaccttatcaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 233 tattccggttctgatgctacatcaacaccttctgtcatcaaacataagctaccttatcaa 174
Query: 361 agcgtcgtagatgcatccaaccacacgctcaaaagtaaattaaaaaattcctcgttcacc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 173 agcgtcgtagatgcatccaaccacacgctcaaaagtaaattaaaaaattcctcgttcacc 114
Query: 421 gccattagtcccacatcaaagaaacaggttttcgaaaaaatacagaggaagttctccatc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113 gccattagtcccacatcaaagaaacaggttttcgaaaaaatacagaggaagttctccatc 54
Query: 481 aaatcacctactgataaagataaacagagtccttct 516
||||||||||||||||||||||||||||||||||||
Sbjct: 53 aaatcacctactgataaagataaacagagtccttct 18
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5712
Number of Sequences: 1807
Number of extensions: 5712
Number of successful extensions: 28
Number of sequences better than 1.0e-20: 1
length of query: 874
length of database: 10,358,551
effective HSP length: 16
effective length of query: 858
effective length of database: 10,329,639
effective search space: 8862830262
effective search space used: 8862830262
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)